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UPC CFI 681/2024

Nov 8, 2024·EP3346403 · DATA PROCESSING, ANALYSIS METHOD OF GENE EXPRESSION DATA TO IDENTIFY ENDOGENOUS REFERENCE GENES

Case details
Status
Case Closed (Patent revoked)
Action
Counterclaim for revocation
Category
Counterclaim for revocation
Parties
Claimants
Representatives
Respondents
Representatives
Division
Munich LD
Technology
  • Electrical engineering
    Computer technology
  • Chemistry
    Biotechnology
Language
English
First decided
Dec 19, 2025
How this compares
The court's record for this kind of case, counted in first-instance rulings. A figure in brackets is the number of rulings a rate rests on.
Patent revokedMedian days to first decision
All UPC37% (34/91)124
Munich LDLockedLocked
Judge Daniel VossLockedLocked
Judge Georg WernerLockedLocked
Judge Marije KnijffLockedLocked
Judge Cornelis Schüller—Locked

At the UPC: Myriad Genetics Group (8 cases)·GXD-Bio Corporation (8 cases)

Decisions
  • 2025-12-19
    Counterclaim for revocationPublic

    Summary: The Munich Local Division dismissed both the infringement action (UPC_CFI_437/2024) brought by GXD-Bio Corporation and the counterclaim for revocation (UPC_CFI_681/2024) brought by the Myriad defendants, concerning EP 3 346 403 (a patent on data processing/gene expression analysis for identifying endogenous reference genes). The Court found no infringement because the accused products (Myriad test kits) did not use the claimed three-step normalization method — the products used a single-step average normalization that differed from the patented calculation method. The counterclaim for revocation was also dismissed, so the patent was maintained. Each party bears its own costs, with costs capped at EUR 600,000 total.

    Show the legal issues (5)
    • Direct and indirect patent infringement
    • Claim construction of normalization method
    • Timeliness of evidence under R. 9.2 RoP
    • Counterclaim for revocation
    • Patent amendment auxiliary requests
Document titleDatePublic
Order2026-01-21Not public
Order2026-01-21Not public
Receipt2026-01-19Not public
Cover sheet2026-01-19Not public
Exhibit document Applicant2026-01-19Not public
Application document Applicant2026-01-19Not public
Decision2025-12-19Public
Case closed2025-12-19Not public
Decision2025-12-19Not public
Decision2025-12-19Not public
Plain-English summary

GXD-Bio Corporation sued multiple Myriad Genetics entities for infringement of EP 3 346 403 B1 (a method for identifying endogenous reference genes using gene expression data) by Myriad's test kits used in breast cancer diagnosis. The Munich Local Division dismissed the infringement action because the accused products use a single-step average normalization rather than the patent's sequential three-step method; simultaneously, the patent was revoked on the Myriad counterclaim for seven UPCA territories, and the amendment application was also dismissed.

Accepted arguments
What the court agreed with — by party.
  • Myriad's test kits do not perform the patented three-step normalization method of claim 1 of EP 3 346 403

    RespondentLegal basis: Art. 25 UPCA; claim construction; direct infringement

    Note: Court accepted that the accused products use a single-step average normalization across three reference genes, which differs from the patent's required sequential normalization against each individual reference gene; the method therefore does not embody the technical teaching.

  • Late-filed argument that the calculation is mathematically equivalent to the patented method must be disregarded

    RespondentLegal basis: R. 9.2 RoP

    Note: Claimant's novel mathematical-equivalence argument raised for the first time at oral hearing was excluded as late-filed; defendants had no opportunity to respond.

  • Revocation counterclaim: EP 3 346 403 lacks validity

    RespondentLegal basis: Art. 65 UPCA

    Note: Patent was revoked in full for all seven requested territories (AT, BE, FR, DE, IT, LU, NL); the excerpt's outcome summary confirms revocation although detailed grounds are not in the visible excerpt.

Rejected arguments
What the court did not agree with — and why.
  • Accused test kits directly infringe claim 1 because the average normalization is mathematically identical to successive per-gene normalization

    ClaimantLegal basis: Art. 25 UPCA; claim construction

    Reason: Mathematical identity of results does not equate to use of the claimed method; the actual configuration (single-step average) is decisive, and the patented method requires further steps not performed by the accused product.

  • Indirect infringement: the test kit is suitable and intended for the patented method using OAZ1 alone as reference gene

    ClaimantLegal basis: Art. 26 UPCA; indirect infringement

    Reason: Claimant did not argue that the test kit, despite its materials and reagents, is suitable and intended for normalization against OAZ1 alone; indirect infringement therefore ruled out.

  • Genes CALM2 and RPL37A can serve as further reference genes under the patent's multi-reference-gene reading

    ClaimantLegal basis: Claim construction; Art. 25 UPCA

    Reason: The patent itself identifies CALM2 and RPL37A as candidate reference genes rejected for insufficient expression stability; using them as reference genes falls outside the claim's scope.

Claim construction notes

Claim 1 of EP 3 346 403 requires a three-step normalization method in which the expression level of a target gene is normalized against each reference gene individually (sequentially). The court held this excludes a single-step average normalization using the mean of three reference gene expression levels, even if the numerical result is mathematically the same. Reference genes CALM2 and RPL37A were identified in the description as 'candidate' genes not selected as 'guide genes' due to insufficient expression stability, placing them outside the claim's scope.